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Wednesday, June 26, 2013

Pathview: pathway based data integration and visualization

Pathview is a newly released/published R/Bioconductor package for pathway based data integration and visualization. It maps and renders a wide variety of biological data on relevant pathway graphs. Pathview easily integrate with pathway and functional analysis tools for large-scale and fully automated analysis pipelines.

The pathview package was recently published in Bioinformatics:
http://bioinformatics.oxfordjournals.org/content/early/2013/06/11/bioinformatics.btt285.full

The package is available through Bioconductor and R-Forge:
http://bioconductor.org/packages/release/bioc/html/pathview.html
http://pathview.r-forge.r-project.org/
Please try it out and let me know if you have any comments/suggestions. Thank you!

URL: http://bioconductor.org/packages/release/bioc/html/pathview.html

Contact Person: Weijun Luo (luo_weijun@yahoo.com)

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